John Skilling’ s Nested Sampling algorithm is a numerical method for fitting models to data in the Bayesian setting, producing estimates of the Bayesian Evidence Z and Information ℋ as well as posterior samples. A central step in the process is the generation of a new random sample from the (typically uniform) prior distribution subject to the constraint that the new prior sample’s likelihood is greater than a current likelihood threshold. One way to test a generation method - the “outside in” approach - is to incorporate it in a Nested Sampling algorithm and compare the resulting model estimates with known cases. Another way - the “inside out” approach - is to validate the uniformity of prior samples produced by the new method before its incorporation in a Nested Sampling system. Using the “inside out” approach, we show that E T Jaynes’ Entropy Concentration Theorem (ECT) and a Bayes Factor test of a particular type provide sensitive tests of uniformity in irregular 2D regions.
History
Source title
AIP Conference Proceedings, Volume 1757
Name of conference
Bayesian Inference and Maximum Entropy Methods in Science and Engineering: 35th International Workshop on Bayesian Inference and Maximum Entropy Methods in Science and Engineering
Location
Postdam, NY
Start date
2015-07-19
End date
2015-07-24
Publisher
AIP Publishing
Place published
New York
Language
en, English
College/Research Centre
Faculty of Science and Information Technology
School
School of Mathematical and Physical Sciences
Rights statement
The version of record: Barrie Stokes(a), Frank Tuyl, and Irene Hudson "Equidistribution testing with Bayes factors and the ECT" AIP Conference Proceedings 2016 1757:1 is available at http://doi.org/10.1063/1.4959055